PKG

Protein list:

Seperate proteins by space | Example

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Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
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Filter Table:

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Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
AMFR	UBB	◼ PHYSICAL_INTERACTION			814.0	0.81	STRING	36370105
AMFR	VCP	◼ PHYSICAL_INTERACTION			932.0	0.93	STRING	36370105
AMFR	UBC	◼ PHYSICAL_INTERACTION			980.0	0.98	STRING	36370105
AMFR	VCP	◼ POST_TRANSLATIONAL_REGULATION	✅	+	28.0	1.0	Omnipath	20126661 22328510 16407162 16987818 17681147 26712280 16275660 21636303 17872946 18835813 19828134 22119785 23333620 23383273 26424800 21343306 21914798 16186510 15331598 17311810
BIRC2	UBB	◼ PHYSICAL_INTERACTION			846.0	0.84	STRING	36370105
BIRC2	UBC	◼ PHYSICAL_INTERACTION			967.0	0.96	STRING	36370105
CLEC19A	UBXN7	◼ PHYSICAL_INTERACTION			0.85	0.85	HuRI	32296183
CRX	PAX6	◼ TRANSCRIPTIONAL_REGULATION	✅	-	2.0	0.8	Omnipath	19850845 18172122
CRX	UBXN7	◼ PHYSICAL_INTERACTION			0.88	0.88	HuRI	32296183
CTDP1	GTF2B	◼ PHYSICAL_INTERACTION			901.0	0.9	STRING	36370105

Showing 1 to 10 of 370 entries